# # Licensed to the Apache Software Foundation (ASF) under one # or more contributor license agreements. See the NOTICE file # distributed with this work for additional information # regarding copyright ownership. The ASF licenses this file # to you under the Apache License, Version 2.0 (the # "License"); you may not use this file except in compliance # with the License. You may obtain a copy of the License at # # http://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, # software distributed under the License is distributed on an # "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY # KIND, either express or implied. See the License for the # specific language governing permissions and limitations # under the License. from __future__ import annotations import bz2 import gzip import shutil from tempfile import NamedTemporaryFile def uncompress_file(input_file_name, file_extension, dest_dir): """Uncompress gz and bz2 files.""" if file_extension.lower() not in (".gz", ".bz2"): raise NotImplementedError( f"Received {file_extension} format. Only gz and bz2 files can currently be uncompressed." ) if file_extension.lower() == ".gz": fmodule = gzip.GzipFile elif file_extension.lower() == ".bz2": fmodule = bz2.BZ2File with fmodule(input_file_name, mode="rb") as f_compressed, NamedTemporaryFile( dir=dest_dir, mode="wb", delete=False ) as f_uncompressed: shutil.copyfileobj(f_compressed, f_uncompressed) return f_uncompressed.name